STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010000159annotation not available (443 aa)    
Predicted Functional Partners:
LOC115579733
Cytochrome b-245 light chain.
    
 0.821
ENSSAUP00010023540
Neutrophil cytosolic factor 1.
     
 0.803
itga4
Integrin subunit alpha 4.
   
 0.780
itga9
Integrin subunit alpha 9.
   
 0.780
LOC115588079
Integrin beta-2-like.
   
 0.687
LOC115572800
Integrin beta-1-like.
   
 0.687
itgb1
Integrin subunit beta 1.
   
 0.687
LOC115588510
Radixin.
    
 0.645
EZR
Ezrin-like.
    
 0.645
LOC115577265
Radixin-like.
    
 0.645
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.