STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010000370Mitochondrial ribosomal protein S23. (197 aa)    
Predicted Functional Partners:
mrps33
Mitochondrial ribosomal protein S33.
   
 0.998
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.998
mrps5
Mitochondrial ribosomal protein S5.
    
 0.998
mrps9
Mitochondrial ribosomal protein S9.
   
 0.998
mrps7
Mitochondrial ribosomal protein S7.
   
 0.998
ENSSAUP00010062002
Mitochondrial ribosomal protein S31.
   
 0.998
ENSSAUP00010001455
Mitochondrial ribosomal protein S28.
   
  0.997
mrps21
Mitochondrial ribosomal protein S21.
   
 0.997
mrps27
Mitochondrial ribosomal protein S27.
    
 0.997
mrps10
Mitochondrial ribosomal protein S10.
   
 0.997
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.