STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010000454annotation not available (99 aa)    
Predicted Functional Partners:
LOC115570806
Uncharacterized LOC115570806.
   
 0.547
cd79a
CD79a molecule.
   
 0.546
ENSSAUP00010033503
annotation not available
    
  0.543
LOC115589184
Uncharacterized LOC115589184.
  
 
  0.518
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.495
LOC115570738
Urokinase-type plasminogen activator-like.
    
   0.495
plat
Plasminogen activator, tissue type.
    
   0.495
plau
Plasminogen activator, urokinase.
    
   0.495
ENSSAUP00010016898
annotation not available
    
  0.471
hgfac
HGF activator.
    
  0.468
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.