STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010000463annotation not available (1258 aa)    
Predicted Functional Partners:
babam2
BRISC and BRCA1 A complex member 2.
    
 0.805
ENSSAUP00010027760
BRCA1/BRCA2-containing complex, subunit 3.
    
 0.805
babam1
BRISC and BRCA1 A complex member 1.
    
 0.800
brca1
BRCA1 DNA repair associated.
    
 0.743
ENSSAUP00010065018
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
  0.728
ENSSAUP00010062713
Ribosomal protein S27a.
    
  0.711
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.673
bard1
BRCA1 associated RING domain 1.
    
 0.667
rpl21
Ribosomal protein L21.
   
   0.625
ENSSAUP00010019090
annotation not available
    
  0.618
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.