STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA7BGolgin A7 family member B. (221 aa)    
Predicted Functional Partners:
zdhhc8
Zinc finger DHHC-type containing 8.
    
 0.768
zdhhc9
Zinc finger DHHC-type containing 9.
    
 0.760
LOC115585640
Palmitoyltransferase ZDHHC5-like.
    
 0.732
ENSSAUP00010018964
Zinc finger DHHC-type containing 5b.
    
 0.732
ENSSAUP00010059939
annotation not available
    
 0.717
LOC115574099
Probable palmitoyltransferase ZDHHC14.
    
 0.678
LOC115578972
Palmitoyltransferase ZDHHC18-like.
    
 0.678
zdhhc18
Zinc finger DHHC-type containing 18.
    
 0.678
ZDHHC14
Probable palmitoyltransferase ZDHHC14.
    
 0.678
LOC115566762
Probable palmitoyltransferase ZDHHC11.
    
 0.613
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.