STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115582453Serine/threonine-protein kinase ULK1-like. (908 aa)    
Predicted Functional Partners:
becn1
Beclin 1.
    
 0.985
atg13
Autophagy related 13.
   
 0.984
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.983
rb1cc1
RB1 inducible coiled-coil 1.
    
 0.983
pik3r4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 0.983
ENSSAUP00010041663
Mechanistic target of rapamycin kinase.
    
 0.981
ATG2B
Autophagy related 2B.
   
 0.969
ENSSAUP00010050264
Autophagy related 2A.
   
 0.969
atg14
Autophagy related 14.
    
 0.968
atg101
Autophagy related 101.
    
 0.966
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.