STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010001684Centrosomal protein 89. (681 aa)    
Predicted Functional Partners:
atrip
ATR interacting protein.
   
    0.797
pigl
Phosphatidylinositol glycan anchor biosynthesis class L.
   
    0.796
LOC115582132
Septin-2.
     
 0.682
LOC115573142
Septin-2.
     
 0.682
rab3il1
RAB3A interacting protein like 1.
     
 0.653
rab3ip
RAB3A interacting protein.
     
 0.653
ENSSAUP00010059550
RAB, member of RAS oncogene family-like 2.
     
 0.627
cep83
Centrosomal protein 83.
     
 0.618
ENSSAUP00010021031
Centrosomal protein 76.
     
 0.615
sclt1
Sodium channel and clathrin linker 1.
     
0.602
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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