STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115580134C5a anaphylatoxin chemotactic receptor 1-like. (368 aa)    
Predicted Functional Partners:
poln
DNA polymerase nu.
    
 0.480
LOC115579699
Prepronociceptin-like.
    
  0.473
ENSSAUP00010014577
Neurotensin.
    
  0.472
haus1
HAUS augmin like complex subunit 1.
    
 0.467
haus8
HAUS augmin like complex subunit 8.
    
  0.456
LOC115592753
Guanine nucleotide-binding protein subunit alpha-14-like.
   
  0.455
edn1
Endothelin 1.
    
  0.416
PENK
proenkephalin-A-like.
    
 0.409
gal
Galanin and GMAP prepropeptide.
    
  0.407
nmu
Neuromedin U.
    
  0.404
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.