STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanos3Nanos C2HC-type zinc finger 3. (231 aa)    
Predicted Functional Partners:
ENSSAUP00010010570
Pumilio RNA-binding family member 1.
   
 
 0.902
edar
Ectodysplasin A receptor.
    
 0.863
ENSSAUP00010024668
CCR4-NOT transcription complex, subunit 1.
    
 
 0.767
piwil1
Piwi like RNA-mediated gene silencing 1.
   
 
 0.699
ENSSAUP00010040172
anti-Mullerian hormone.
    
 
 0.644
dazl
Deleted in azoospermia like.
    
 
 0.627
piwil2
Piwi like RNA-mediated gene silencing 2.
   
 
 0.610
ENSSAUP00010024047
annotation not available
      
 0.595
prdm14
PR/SET domain 14.
    
 
 0.584
ENSSAUP00010048598
CCR4-NOT transcription complex, subunit 3b.
    
 
 0.582
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.