STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr14Myotubularin related protein 14. (654 aa)    
Predicted Functional Partners:
mtmr6
Myotubularin related protein 6.
     
 0.912
mtm1
Myotubularin 1.
     
 0.896
mtmr2
Myotubularin related protein 2.
     
 0.893
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.877
LOC115590139
Myotubularin-related protein 1-like.
     
 0.871
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
 
 0.868
SACM1L
Phosphatidylinositide phosphatase SAC1-B.
     
 0.856
LOC115578907
Phosphatidylinositide phosphatase SAC1-A-like.
     
 0.856
mtmr3
Myotubularin related protein 3.
     
0.855
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.851
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.