STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115584483Transcription factor HES-5-like. (231 aa)    
Predicted Functional Partners:
hes4
Hes family bHLH transcription factor 4.
     
0.784
ENSSAUP00010061164
annotation not available
     
 0.784
hes1
Hes family bHLH transcription factor 1.
     
0.784
fancc
FA complementation group C.
    
  0.678
fancf
FA complementation group F.
    
  0.678
ENSSAUP00010030897
FA complementation group G.
    
  0.678
fancl
FA complementation group L.
    
  0.678
LOC115596466
Transcription cofactor HES-6-like.
     
0.622
LOC115573149
Transcription factor HES-1-like.
     
0.622
ENSSAUP00010061776
annotation not available
     
 0.622
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.