STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimbp2RIMS binding protein 2. (1561 aa)    
Predicted Functional Partners:
ENSSAUP00010014250
annotation not available
    
 0.997
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.997
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 0.777
ENSSAUP00010032314
Regulating synaptic membrane exocytosis 1a.
    
 0.777
rims3
Regulating synaptic membrane exocytosis 3.
    
 0.777
tspo
Translocator protein.
    
 0.735
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
    
   0.717
mapk8ip2
Mitogen-activated protein kinase 8 interacting protein 2.
    
   0.717
ENSSAUP00010025116
annotation not available
   
 0.715
UNC13C
Unc-13 homolog C.
   
 0.715
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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