STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNIP2Kv channel-interacting protein 2-like. (263 aa)    
Predicted Functional Partners:
LOC115585246
Potassium voltage-gated channel subfamily D member 3-like.
    
 0.828
KCND3
Potassium voltage-gated channel subfamily D member 3-like.
    
 0.828
LOC115586705
Potassium voltage-gated channel subfamily D member 2-like.
    
 0.828
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.819
ENSSAUP00010067569
Calcium/calmodulin-dependent serine protein kinase b.
    
 0.819
ENSSAUP00010046450
Myosin IIIA.
    
 0.707
ENSSAUP00010066107
Myosin IIIB.
    
 0.707
xpc
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.670
ENSSAUP00010067168
annotation not available
    
  0.627
nudt12
Nudix hydrolase 12.
    
  0.621
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.