STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp49Ubiquitin specific peptidase 49. (672 aa)    
Predicted Functional Partners:
taf9
TATA-box binding protein associated factor 9.
    
 0.921
taf10
TATA-box binding protein associated factor 10.
    
 0.920
tada3
Transcriptional adaptor 3.
    
 0.917
tada2a
Transcriptional adaptor 2A.
    
 0.895
tada2b
Transcriptional adaptor 2B.
    
 0.895
sgf29
SAGA complex associated factor 29.
   
 0.879
ENSSAUP00010020318
K(lysine) acetyltransferase 2B.
    
 0.878
LOC115586788
Cat eye syndrome critical region protein 2.
    
 0.878
ENSSAUP00010053308
K(lysine) acetyltransferase 2A.
    
 0.878
ENSSAUP00010019085
annotation not available
    
 0.873
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.