STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115587441Immunoglobulin-like domain-containing receptor 1. (570 aa)    
Predicted Functional Partners:
lrit3
Leucine rich repeat, Ig-like and transmembrane domains 3.
  
 
  0.680
lrit1
Leucine rich repeat, Ig-like and transmembrane domains 1.
  
 
  0.659
LOC115596220
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
  
 
  0.642
LOC115570847
WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2-like.
  
 
   0.533
LOC115574825
WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2-like.
  
 
   0.529
ENSSAUP00010011158
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1.
  
 
   0.527
LOC115566471
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
  
 
  0.523
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
  0.518
rxfp1
Relaxin family peptide receptor 1.
    
  0.518
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
  0.518
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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