STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dync1li2Dynein cytoplasmic 1 light intermediate chain 2. (494 aa)    
Predicted Functional Partners:
ENSSAUP00010021873
Dynein, light chain, Tctex-type 1.
    
 0.967
LOC115572476
Cytoplasmic dynein 1 intermediate chain 2-like.
   
 0.965
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.955
ENSSAUP00010065597
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 0.955
dynlrb1
Dynein light chain roadblock-type 1.
    
 0.947
dynlrb2
Dynein light chain roadblock-type 2.
    
 0.947
DYNLT3
Dynein light chain Tctex-type 3.
    
 0.942
LOC115577055
Dynein light chain Tctex-type 3-like.
    
 0.942
DYNC2H1
Dynein cytoplasmic 2 heavy chain 1.
    
 0.936
dync1h1
Dynein cytoplasmic 1 heavy chain 1.
    
 0.936
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.