STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010003272annotation not available (228 aa)    
Predicted Functional Partners:
bysl
Bystin like.
   
 0.938
tsr1
TSR1 ribosome maturation factor.
   
 0.929
ltv1
LTV1 ribosome biogenesis factor.
   
 0.925
nob1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.914
ENSSAUP00010065018
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.912
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.904
ENSSAUP00010058064
Ribosomal protein S2.
    
 0.885
ENSSAUP00010005541
annotation not available
   
  0.876
rps23
Ribosomal protein S23.
   
  0.874
rps6
Ribosomal protein S6.
    
 0.873
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.