STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010003320annotation not available (258 aa)    
Predicted Functional Partners:
LOC115583286
Complement C1q subcomponent subunit C-like.
    
  0.541
ENSSAUP00010039139
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.450
LOC115578830
Histone-lysine N-methyltransferase SETDB1-B-like.
    
  0.449
ENSSAUP00010013686
annotation not available
    
  0.449
taf9
TATA-box binding protein associated factor 9.
    
  0.449
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
  0.449
setdb1
SET domain bifurcated histone lysine methyltransferase 1.
    
  0.449
taf10
TATA-box binding protein associated factor 10.
    
  0.447
wdr18
WD repeat domain 18.
    
  0.442
pot1
Protection of telomeres 1.
    
  0.438
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.