STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC93Coiled-coil domain-containing protein 93-like. (635 aa)    
Predicted Functional Partners:
ENSSAUP00010029354
Coiled-coil domain containing 22.
    
 
 0.965
COMMD10
COMM domain containing 10.
    
 
 0.929
commd2
COMM domain containing 2.
    
 
 0.920
commd1
Copper metabolism domain containing 1.
   
 
 0.912
LOC115569253
COMM domain-containing protein 5-like.
    
 
 0.902
ENSSAUP00010015915
COMM domain containing 4.
    
 
 0.901
vps35l
VPS35 endosomal protein sorting factor like.
    
 
 0.880
commd8
COMM domain containing 8.
    
 
 0.878
vps26c
VPS26 endosomal protein sorting factor C.
    
 
 0.876
vps29
VPS29 retromer complex component.
    
 
 0.870
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.