STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galnsGalactosamine (N-acetyl)-6-sulfatase. (526 aa)    
Predicted Functional Partners:
glb1
Galactosidase beta 1.
   
 0.919
LOC115588426
Beta-galactosidase-like.
   
 0.919
ENSSAUP00010059474
Arylsulfatase A.
  
0.868
gda
Guanine deaminase.
   
  0.795
ENSSAUP00010003376
Adenylate kinase 8.
   
 
  0.789
itpa
Inosine triphosphatase.
    
  0.789
ak4
Adenylate kinase 4.
   
 
  0.789
ENSSAUP00010035709
Adenylate kinase 3.
   
 
  0.789
ak2
Adenylate kinase 2.
   
 
  0.789
gmps
Guanine monophosphate synthase.
    
  0.789
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.