STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbfa2t3CBFA2/RUNX1 partner transcriptional co-repressor 3. (743 aa)    
Predicted Functional Partners:
LOC115567700
Cytochrome b5 reductase 4.
   
 0.873
spi1
Spi-1 proto-oncogene.
    
 0.865
med10
Mediator complex subunit 10.
    
 0.853
med14
Mediator complex subunit 14.
    
 0.853
med17
Mediator complex subunit 17.
    
 0.852
med6
Mediator complex subunit 6.
    
 0.850
ENSSAUP00010068964
Mediator complex subunit 7.
    
 0.850
ENSSAUP00010006797
Si:ch211-131k2.3.
  
 
  0.845
pla2g4a
Phospholipase A2 group IVA.
    
  0.842
suox
Sulfite oxidase.
    
 0.840
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.