STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp40Ubiquitin specific peptidase 40. (1295 aa)    
Predicted Functional Partners:
ENSSAUP00010029879
Tumor protein p53.
    
 0.977
ENSSAUP00010062713
Ribosomal protein S27a.
   
 0.957
LOC115572968
ubiquitin-60S ribosomal protein L40-like.
   
 0.946
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.946
gmps
Guanine monophosphate synthase.
   
 
 0.937
daxx
Death domain associated protein.
    
 0.922
dnmt1
DNA methyltransferase 1.
   
 
 0.913
uvssa
UV stimulated scaffold protein A.
    
 0.904
ENSSAUP00010019090
annotation not available
   
 0.899
ENSSAUP00010062031
Ubiquitin B.
   
 0.899
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.