STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mceemethylmalonyl-CoA epimerase. (179 aa)    
Predicted Functional Partners:
mmut
methylmalonyl-CoA mutase.
  
 
 0.961
pccb
propionyl-CoA carboxylase subunit beta.
 
 
 0.950
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
  0.903
ACSF3
acyl-CoA synthetase family member 3.
    
 0.900
ECHDC1
ethylmalonyl-CoA decarboxylase 1.
  
 
 0.899
mccc1
methylcrotonoyl-CoA carboxylase 1.
  
 
 0.888
pcca
propionyl-CoA carboxylase subunit alpha.
  
 
 0.888
park7
Parkinsonism associated deglycase.
  
 
 0.885
ENSSAUP00010042829
succinate-CoA ligase, alpha subunit.
  
 
 0.872
LOC115591001
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like.
  
 
 0.869
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.