STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgr4Leucine rich repeat containing G protein-coupled receptor 4. (981 aa)    
Predicted Functional Partners:
ccdc60
Coiled-coil domain containing 60.
    
 0.949
rspo3
R-spondin 3.
  
 0.948
ENSSAUP00010035498
R-spondin 1.
  
 0.946
rnf43
Ring finger protein 43.
    
 0.936
rspo2
R-spondin 2.
  
 0.931
LOC115582671
R-spondin-2-like.
  
 0.918
RSPO3
R-spondin 3.
  
 0.904
GNAS
GNAS complex locus.
    
 0.870
ENSSAUP00010051018
annotation not available
    
 0.870
ENSSAUP00010060005
annotation not available
    
 0.870
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.