STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115593652Endonuclease domain-containing 1 protein-like. (285 aa)    
Predicted Functional Partners:
ENSSAUP00010045339
Zgc:153681.
    
 0.770
ENSSAUP00010015528
S100 calcium binding protein A10a.
    
 0.769
MSL3
MSL complex subunit 3.
    
 0.769
maml1
Mastermind like transcriptional coactivator 1.
    
 0.673
ENSSAUP00010067168
annotation not available
   
  0.641
ENSSAUP00010003976
Im:7152348.
   
 0.638
NCSTN
Nicastrin.
    
 0.638
arid4a
AT-rich interaction domain 4A.
    
 0.636
ENSSAUP00010026940
Translocase of outer mitochondrial membrane 20.
    
 0.636
LOC115597688
E3 ubiquitin-protein ligase MSL2-like.
    
 0.634
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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