STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115583129Pepsin A-like. (371 aa)    
Predicted Functional Partners:
ctso
Cathepsin O.
   
 0.674
LOC115569225
Cathepsin L-like.
   
 0.674
ENSSAUP00010003976
Im:7152348.
    
 0.664
LOC115580781
Lysosomal protective protein-like.
   
 0.644
cpvl
Carboxypeptidase vitellogenic like.
   
 0.644
ENSSAUP00010030504
annotation not available
   
 0.644
scpep1
Serine carboxypeptidase 1.
   
 0.635
atp6ap2
ATPase H+ transporting accessory protein 2.
   
 0.615
LOC115572434
reticulon-3-B-like.
    
  0.607
LOC115590476
Reticulon-3-like.
    
  0.607
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.