STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115570370Myosin regulatory light chain 2, smooth muscle minor isoform. (172 aa)    
Predicted Functional Partners:
LOC115588272
Myosin light chain 1, skeletal muscle isoform.
   
0.970
ENSSAUP00010001068
annotation not available
   
0.965
LOC115585031
Myosin light polypeptide 6.
   
0.965
LOC115582708
Myosin-9-like.
   
 0.949
ENSSAUP00010001624
Myosin, heavy chain 10, non-muscle.
   
 0.934
MYH10
Myosin heavy chain 10.
   
 0.934
LOC115566977
Myosin-10-like.
   
 0.934
ENSSAUP00010062306
Myosin, heavy chain 9b, non-muscle.
   
 0.934
myh11
Myosin heavy chain 11.
   
 0.929
ENSSAUP00010045917
annotation not available
   
 0.929
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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