STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snu13Small nuclear ribonucleoprotein 13. (128 aa)    
Predicted Functional Partners:
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.999
fbl
Fibrillarin.
   
 0.999
nop56
NOP56 ribonucleoprotein.
   
 0.999
utp15
UTP15 small subunit processome component.
   
 0.999
ENSSAUP00010065018
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.999
nop58
NOP58 ribonucleoprotein.
   
 0.999
rps6
Ribosomal protein S6.
  
 0.998
LOC115577492
40S ribosomal protein S18.
  
 0.997
rps3a
Ribosomal protein S3A.
   
 0.997
rps28
Ribosomal protein S28.
  
 0.997
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.