STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010005833Keratin 98. (432 aa)    
Predicted Functional Partners:
ENSSAUP00010046194
annotation not available
    
  0.878
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.871
LOC115588252
ranBP2-like and GRIP domain-containing protein 3.
   
 0.690
LOC115583917
Keratin, type II cytoskeletal 8-like.
  
0.667
kdm6b
Lysine demethylase 6B.
   
 0.642
ENSSAUP00010046198
annotation not available
    
  0.636
LOC115583920
Keratin, type II cytoskeletal 8-like.
  
0.636
ENSSAUP00010014250
annotation not available
   
  0.617
RIMS2
Regulating synaptic membrane exocytosis 2.
   
  0.617
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.617
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.