STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdk5Cyclin dependent kinase 5. (296 aa)    
Predicted Functional Partners:
ENSSAUP00010008695
Si:dkeyp-92c9.2.
    
 0.974
cdk5r2
Cyclin dependent kinase 5 regulatory subunit 2.
    
 0.974
LOC115574949
Cyclin-dependent kinase 5 activator 1-like.
    
 0.974
ENSSAUP00010067301
annotation not available
    
 0.974
LOC115576271
Microtubule-associated protein tau-like.
    
 0.949
ENSSAUP00010035619
annotation not available
    
 0.949
ENSSAUP00010043032
annotation not available
    
 0.949
ENSSAUP00010060306
Microtubule-associated protein tau a.
    
 0.949
ppp1r1b
Protein phosphatase 1 regulatory inhibitor subunit 1B.
    
 0.871
PPP1R1B
Protein phosphatase 1 regulatory subunit 1B-like.
    
 0.871
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.