STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115575024ATP synthase F(0) complex subunit C3, mitochondrial-like. (139 aa)    
Predicted Functional Partners:
atp5f1c
ATP synthase F1 subunit gamma.
  
 0.998
atp5f1d
ATP synthase F1 subunit delta.
  
 0.997
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.996
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.991
atp5pf
ATP synthase peripheral stalk subunit F6.
   
 0.990
atp5f1a
ATP synthase F1 subunit alpha.
  
 0.988
ATP5F1A
ATP synthase subunit alpha, mitochondrial-like.
  
 0.988
LOC115587038
V-type proton ATPase subunit E 1-like.
  
 0.983
ENSSAUP00010030282
ATPase H+ transporting V1 subunit E1b.
  
 0.983
ENSSAUP00010041047
annotation not available
  
 0.983
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.