STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nol9Nucleolar protein 9. (699 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.994
ENSSAUP00010004701
LAS1 like ribosome biogenesis factor.
   
 0.976
ENSSAUP00010004706
CREB/ATF bZIP transcription factor.
   
 0.976
tex10
Testis expressed 10.
   
 0.972
pelp1
Proline, glutamate and leucine rich protein 1.
   
 0.959
heatr1
HEAT repeat containing 1.
   
 
  0.875
wdr12
WD repeat domain 12.
   
 0.874
BOP1
BOP1 ribosomal biogenesis factor.
   
 
 0.832
cep152
Centrosomal protein 152.
   
 
 0.832
xrn2
5'-3' exoribonuclease 2.
   
 
 0.820
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.