STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010006956annotation not available (348 aa)    
Predicted Functional Partners:
ccna2
Cyclin A2.
   
 
 0.801
ccna1
Cyclin A1.
   
 
 0.788
LOC115583992
Protein kinase C delta type-like.
    
 0.782
prkcd
Protein kinase C delta.
    
 0.782
prkcq
Protein kinase C theta.
    
 0.782
ENSSAUP00010018613
Protein kinase, AMP-activated, alpha 2 catalytic subunit.
     
 0.775
prkaa1
Protein kinase AMP-activated catalytic subunit alpha 1.
     
 0.774
LOC115594508
Heterogeneous nuclear ribonucleoprotein A/B-like.
  
 0.759
LOC115592897
Heterogeneous nuclear ribonucleoprotein K-like.
   
 
 0.726
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.726
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.