STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nyxNyctalopin. (481 aa)    
Predicted Functional Partners:
robo4
Roundabout guidance receptor 4.
   
 0.834
LOC115594597
Roundabout homolog 2-like.
   
 0.834
LOC115594478
Roundabout homolog 1-like.
   
 0.834
LOC115575175
Roundabout homolog 2-like.
   
 0.834
ENSSAUP00010058856
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
   
 0.834
ENSSAUP00010063690
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
   
 0.834
ntng1
Netrin G1.
    
 0.776
LOC115573376
netrin-G1-like.
    
 0.776
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 
 0.725
LOC115581773
Adhesion G protein-coupled receptor L1-like.
    
 
 0.725
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.