STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010007793annotation not available (890 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.623
LOC115587574
Thioredoxin domain-containing protein 3 homolog.
    
   0.563
LOC115575901
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.
    
 0.522
ENSSAUP00010002647
annotation not available
    
  0.479
ENSSAUP00010014318
Trio Rho guanine nucleotide exchange factor a.
    
  0.479
ENSSAUP00010051705
annotation not available
    
  0.479
ENSSAUP00010069439
Kalirin RhoGEF kinase a.
    
  0.479
ENSSAUP00010023026
PARK2 co-regulated.
   
 
 0.470
ENSSAUP00010037764
EF-hand domain family, member B.
    
   0.468
ripk4
Receptor interacting serine/threonine kinase 4.
    
  0.443
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.