STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115579365Leucine-rich repeat-containing protein 14B-like. (527 aa)    
Predicted Functional Partners:
ENSSAUP00010059390
Ankyrin repeat and SOCS box-containing 12a.
   
  
 0.535
asb16
Ankyrin repeat and SOCS box containing 16.
   
  
 0.507
ENSSAUP00010036362
Phosphoinositide-3-kinase interacting protein 1.
      
 0.502
lrrc20
Leucine rich repeat containing 20.
      
 0.501
osbpl6
Oxysterol binding protein like 6.
      
 0.471
tmem38a
Transmembrane protein 38A.
   
  
 0.441
asb12
Ankyrin repeat and SOCS box containing 12.
   
  
 0.438
LOC115568385
Ankyrin repeat and SOCS box protein 5-like.
      
 0.422
osbpl7
Oxysterol binding protein like 7.
      
 0.422
osbpl11
Oxysterol binding protein like 11.
      
 0.418
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.