STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxk1Forkhead box K1. (675 aa)    
Predicted Functional Partners:
bap1
BRCA1 associated protein 1.
    
 0.882
asxl2
ASXL transcriptional regulator 2.
    
 0.836
uchl5
Ubiquitin C-terminal hydrolase L5.
    
 0.808
suox
Sulfite oxidase.
     
 0.773
LOC115584752
Putative Polycomb group protein ASXL1.
   
 0.767
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase.
    
 0.759
LOC115582569
Host cell factor 1-like.
    
 0.695
ENSSAUP00010050016
annotation not available
    
 0.695
ENSSAUP00010050035
annotation not available
    
 0.695
hcfc2
Host cell factor C2.
    
 0.695
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.