STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010008605annotation not available (376 aa)    
Predicted Functional Partners:
lrit3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 0.718
LOC115566471
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
    
 0.706
LOC115596220
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 0.706
lrit1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.706
LOC115588680
SLIT and NTRK-like protein 5.
   
 0.676
LOC115574353
Leucine-rich repeat-containing protein 15-like.
   
 0.676
nyx
Nyctalopin.
   
 0.676
LOC115578891
Leucine-rich repeat-containing protein 3B-like.
   
 0.676
ENSSAUP00010033211
Leucine rich repeat containing 3Ca.
   
 0.676
ENSSAUP00010033228
Leucine rich repeat containing 3.
   
 0.676
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (24%) [HD]