STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115585263cyclin-T1-like. (690 aa)    
Predicted Functional Partners:
cdk9
Cyclin dependent kinase 9.
   
 0.988
aff4
AF4/FMR2 family member 4.
   
 0.956
cdk13
Cyclin dependent kinase 13.
   
 0.917
cdk12
Cyclin dependent kinase 12.
   
 0.917
ENSSAUP00010022370
annotation not available
   
 0.872
ENSSAUP00010022373
annotation not available
   
 0.872
LOC115575471
Protein HEXIM-like.
    
 
 0.859
supt5h
SPT5 homolog, DSIF elongation factor subunit.
   
 0.849
larp7
La ribonucleoprotein 7, transcriptional regulator.
   
 0.836
ENSSAUP00010041510
Negative elongation factor complex member E.
    
 0.822
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.