STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010009953Calcium channel, voltage-dependent, alpha 2/delta subunit 4b. (1077 aa)    
Predicted Functional Partners:
cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.878
LOC115576439
Voltage-dependent calcium channel gamma-1 subunit-like.
    
 0.878
LOC115572433
Voltage-dependent L-type calcium channel subunit beta-2-like.
   
 0.779
LOC115576865
Voltage-dependent L-type calcium channel subunit beta-4-like.
   
 0.779
cacnb2
Calcium voltage-gated channel auxiliary subunit beta 2.
   
 0.779
cacnb3
Calcium voltage-gated channel auxiliary subunit beta 3.
   
 0.779
cacnb1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 0.779
cacnb4
Calcium voltage-gated channel auxiliary subunit beta 4.
   
 0.779
ENSSAUP00010053572
Calcium channel, voltage-dependent, beta 3b.
   
 0.779
LOC115575932
Voltage-dependent calcium channel gamma-5 subunit-like.
     
 0.767
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.