STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010010103annotation not available (181 aa)    
Predicted Functional Partners:
tada3
Transcriptional adaptor 3.
    
 0.970
ENSSAUP00010039139
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.964
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.960
supt20h
SPT20 homolog, SAGA complex component.
    
 0.959
taf10
TATA-box binding protein associated factor 10.
    
 0.947
taf9
TATA-box binding protein associated factor 9.
    
 0.946
LOC115566711
Transcription and mRNA export factor ENY2-2.
    
 0.946
LOC115579371
Transcription and mRNA export factor ENY2-2-like.
    
 0.946
LOC115575319
Ubiquitin carboxyl-terminal hydrolase 22-like.
    
 0.940
LOC115570636
Ubiquitin carboxyl-terminal hydrolase 22.
    
 0.940
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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