STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115581385Beta-crystallin B2. (208 aa)    
Predicted Functional Partners:
cryaa
Crystallin alpha A.
   
 
 0.869
LOC115593886
Alpha-crystallin A chain-like.
   
 
 0.771
CRYGS
Gamma-crystallin S-like.
   
 
0.676
CRYGS-2
Gamma-crystallin S-like.
   
 
0.676
ENSSAUP00010020172
Crystallin, beta A2b.
   
  
0.649
LOC115573979
Beta-crystallin A1-1.
   
  
0.637
LOC115593631
Beta-crystallin A3-like.
   
  
0.631
c9h2orf80
Chromosome 9 C2orf80 homolog.
   
 
 0.514
BFSP1
Beaded filament structural protein 1.
      
 0.509
bfsp2
Beaded filament structural protein 2.
      
 0.470
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.