STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115571818Extracellular calcium-sensing receptor-like. (841 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.623
LOC115575901
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.
    
 0.565
LOC115587574
Thioredoxin domain-containing protein 3 homolog.
    
   0.563
LOC115585049
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
    
 0.526
ENSSAUP00010039256
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 0.526
ENSSAUP00010002647
annotation not available
    
  0.479
ENSSAUP00010014318
Trio Rho guanine nucleotide exchange factor a.
    
  0.479
ENSSAUP00010051705
annotation not available
    
  0.479
ENSSAUP00010069439
Kalirin RhoGEF kinase a.
    
  0.479
ENSSAUP00010023026
PARK2 co-regulated.
   
 
 0.470
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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