STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115574243Uridine-cytidine kinase-like 1. (546 aa)    
Predicted Functional Partners:
uprt
Uracil phosphoribosyltransferase homolog.
 
0.976
LOC115584378
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
  
 0.932
LOC115583853
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
  
 0.932
ctnnbip1
Catenin beta interacting protein 1.
    
 0.894
ENSSAUP00010020186
Uridine monophosphate synthetase.
  
 0.878
ENSSAUP00010013380
APC regulator of WNT signaling pathway 2.
   
 0.872
ENSSAUP00010031688
APC regulator of WNT signaling pathway.
   
 0.872
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.866
mst1r
Macrophage stimulating 1 receptor.
    
 0.866
LOC115583471
Macrophage-stimulating protein receptor-like.
    
 0.866
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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