STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010010688Mitochondrial methionyl-tRNA formyltransferase. (372 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
  
 
 0.973
ENSSAUP00010053745
Phosphoribosylglycinamide formyltransferase.
    
 0.973
LOC115582377
Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial-like.
  
 
 0.965
ENSSAUP00010052982
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
  
 
 0.965
pdf
Peptide deformylase, mitochondrial.
  
 0.960
mars1
methionyl-tRNA synthetase 1.
    
 0.952
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.949
ENSSAUP00010044894
Methylenetetrahydrofolate reductase (NAD(P)H).
    
 0.943
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.939
ugdh
UDP-glucose 6-dehydrogenase.
  
 
 0.937
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.