STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115568543Ubiquitin-conjugating enzyme E2 2-like. (151 aa)    
Predicted Functional Partners:
ENSSAUP00010009824
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.998
trip12
Thyroid hormone receptor interactor 12.
   
 0.963
fancm
FA complementation group M.
    
 0.913
rbx1
Ring-box 1.
   
 0.911
ENSSAUP00010002409
APC11 anaphase promoting complex subunit 11 homolog (yeast).
    
 0.908
cul1
Cullin 1.
   
 0.897
ENSSAUP00010062713
Ribosomal protein S27a.
   
 0.893
ENSSAUP00010023041
Baculoviral IAP repeat containing 6.
   
0.892
ENSSAUP00010003976
Im:7152348.
    
 0.886
ENSSAUP00010019090
annotation not available
   
 0.886
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.