STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC3Syndecan-3-like. (452 aa)    
Predicted Functional Partners:
LOC115584013
Syndecan-4-like.
   
0.934
ENSSAUP00010031878
annotation not available
   
 0.927
ENSSAUP00010028417
annotation not available
   
0.917
dcn
Decorin.
     
 0.707
ENSSAUP00010008764
Exostosin glycosyltransferase 2.
     
 0.691
ENSSAUP00010041549
Pleiotrophin.
    
 
 0.678
agrn
Agrin.
     
 0.674
ncan
Neurocan.
     
 0.669
LOC115572450
Neurocan core protein-like.
     
 0.658
ENSSAUP00010047549
Versican b.
     
 0.657
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.