STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SV2CSynaptic vesicle glycoprotein 2C-like. (736 aa)    
Predicted Functional Partners:
lamc3
Laminin subunit gamma 3.
     
 0.862
LAMC2
Laminin subunit gamma 2.
     
 0.861
lamb1
Laminin subunit beta 1.
     
 0.849
ENSSAUP00010040255
Laminin, beta 2 (laminin S).
     
 0.848
LOC115595642
Laminin subunit beta-1-like.
     
 0.845
LAMA2
Laminin subunit alpha 2.
     
 0.821
ENSSAUP00010033526
annotation not available
     
 0.817
pla2g4a
Phospholipase A2 group IVA.
    
 0.800
ENSSAUP00010013259
annotation not available
     
 0.794
LAMA3
Laminin subunit alpha 3.
     
 0.794
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.