STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115581327Uncharacterized LOC115581327. (1410 aa)    
Predicted Functional Partners:
ENSSAUP00010046194
annotation not available
    
  0.878
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.855
LOC115588252
ranBP2-like and GRIP domain-containing protein 3.
    
 0.682
ENSSAUP00010046198
annotation not available
    
  0.636
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.617
ENSSAUP00010014250
annotation not available
    
  0.616
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.616
LOC115593995
Lysine-specific demethylase 6B-like.
    
 0.614
kdm6b
Lysine demethylase 6B.
    
 0.614
kdm6a
Lysine demethylase 6A.
    
 0.614
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.