ENSSAUP00010011961 protein (Sparus aurata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSAUP00010011961

annotation not available (124 aa)

Predicted Functional Partners:

agt

0.782

LOC115569225

0.749

ENSSAUP00010017429

0.739

LOC115580781

0.727

ctso

0.722

cpvl

0.683

LOC115573946

0.677

LOC115580670

0.677

atp6ap2

0.674

ENSSAUP00010003976

0.664

Your Current Organism:

Sparus aurata

NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSAUP00010003976	ENSSAUP00010011961	ENSSAUP00010003976	ENSSAUP00010011961	Im:7152348.	annotation not available	0.664
ENSSAUP00010003976	LOC115580781	ENSSAUP00010003976	ENSSAUP00010012132	Im:7152348.	Lysosomal protective protein-like.	0.434
ENSSAUP00010003976	cpvl	ENSSAUP00010003976	ENSSAUP00010016202	Im:7152348.	Carboxypeptidase vitellogenic like.	0.434
ENSSAUP00010011961	ENSSAUP00010003976	ENSSAUP00010011961	ENSSAUP00010003976	annotation not available	Im:7152348.	0.664
ENSSAUP00010011961	ENSSAUP00010017429	ENSSAUP00010011961	ENSSAUP00010017429	annotation not available	Cathepsin C.	0.739
ENSSAUP00010011961	LOC115569225	ENSSAUP00010011961	ENSSAUP00010059683	annotation not available	Cathepsin L-like.	0.749
ENSSAUP00010011961	LOC115573946	ENSSAUP00010011961	ENSSAUP00010006050	annotation not available	Cathepsin B-like.	0.677
ENSSAUP00010011961	LOC115580670	ENSSAUP00010011961	ENSSAUP00010018017	annotation not available	Cathepsin B-like.	0.677
ENSSAUP00010011961	LOC115580781	ENSSAUP00010011961	ENSSAUP00010012132	annotation not available	Lysosomal protective protein-like.	0.727
ENSSAUP00010011961	agt	ENSSAUP00010011961	ENSSAUP00010004479	annotation not available	Angiotensinogen.	0.782
ENSSAUP00010011961	atp6ap2	ENSSAUP00010011961	ENSSAUP00010020235	annotation not available	ATPase H+ transporting accessory protein 2.	0.674
ENSSAUP00010011961	cpvl	ENSSAUP00010011961	ENSSAUP00010016202	annotation not available	Carboxypeptidase vitellogenic like.	0.683
ENSSAUP00010011961	ctso	ENSSAUP00010011961	ENSSAUP00010005756	annotation not available	Cathepsin O.	0.722
ENSSAUP00010017429	ENSSAUP00010011961	ENSSAUP00010017429	ENSSAUP00010011961	Cathepsin C.	annotation not available	0.739
ENSSAUP00010017429	LOC115569225	ENSSAUP00010017429	ENSSAUP00010059683	Cathepsin C.	Cathepsin L-like.	0.912
ENSSAUP00010017429	LOC115573946	ENSSAUP00010017429	ENSSAUP00010006050	Cathepsin C.	Cathepsin B-like.	0.863
ENSSAUP00010017429	LOC115580670	ENSSAUP00010017429	ENSSAUP00010018017	Cathepsin C.	Cathepsin B-like.	0.863
ENSSAUP00010017429	LOC115580781	ENSSAUP00010017429	ENSSAUP00010012132	Cathepsin C.	Lysosomal protective protein-like.	0.792
ENSSAUP00010017429	agt	ENSSAUP00010017429	ENSSAUP00010004479	Cathepsin C.	Angiotensinogen.	0.674
ENSSAUP00010017429	cpvl	ENSSAUP00010017429	ENSSAUP00010016202	Cathepsin C.	Carboxypeptidase vitellogenic like.	0.511